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1.10(beta)
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Darwin
1.10(beta)
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Container and utility functions for factor graphs. More...
Public Member Functions | |
| drwnFactorGraph () | |
| construct an empty factor graph | |
| drwnFactorGraph (const drwnVarUniversePtr &u) | |
construct a factor graph based on variables in universe u | |
| drwnFactorGraph (const drwnFactorGraph &g) | |
| copy constructor | |
| virtual const char * | type () const |
| returns object type as a string (e.g., Foo::type() { return "Foo"; }) | |
| virtual drwnFactorGraph * | clone () const |
| returns a copy of the class usually implemented as virtual Foo* clone() { return new Foo(*this); } | |
| const drwnVarUniversePtr & | getUniverse () const |
| return the universe of variables for this factor graph | |
| int | numVariables () const |
| returns the number of variables in the universe | |
| int | numFactors () const |
| returns the number of factors in the graph | |
| int | numEdges () const |
| returns the number of (hyper-)edges in the graph | |
| void | addFactor (drwnTableFactor *psi) |
| add a factor to the graph and takes ownership | |
| void | copyFactor (const drwnTableFactor *psi) |
| add a factor to the graph by copying | |
| const drwnTableFactor * | getFactor (int indx) const |
| returns the factor at index indx | |
| void | deleteFactor (int indx) |
| delete a factor from the graph | |
| int | findFactor (const drwnClique &clique, bool bAllowSuperset=false) const |
| returns the index of a factor defined over the clique (or a superset of it) | |
| drwnClique | getClique (int indx) const |
| returns the clique for the factor at index indx | |
| drwnEdge | getEdge (int eindx) const |
| returns the indices for the factors adjacent to edge eindx | |
| drwnClique | getSepSet (int eindx) const |
| returns the set of separator variables for edge eindx | |
| double | getEnergy (const drwnFullAssignment &x) const |
| compute energy for a given assignment | |
| bool | addEdge (const drwnEdge &e) |
| add an edge to the graph (and compute separator set) | |
| bool | connectGraph (const set< drwnEdge > &edges) |
| connect graph with given set of edges | |
| virtual bool | connectGraph () |
| connect graph using max-spanning tree for each variable | |
| bool | connectBetheApprox () |
| connect graph using the bethe-approximation | |
| bool | save (drwnXMLNode &xml) const |
| write object to XML node (see also write) | |
| bool | load (drwnXMLNode &xml) |
| read object from XML node (see also read) | |
| drwnTableFactor * | operator[] (unsigned indx) |
| const drwnTableFactor * | operator[] (unsigned indx) const |
 Public Member Functions inherited from drwnWriteable | |
| bool | write (const char *filename) const |
| write object to file (calls save) | |
| bool | read (const char *filename) |
| read object from file (calls load) | |
| void | dump () const |
| print object's current state to standard output (for debugging) | |
Static Public Member Functions | |
| static drwnClique | getSepSet (const drwnFactor &psiA, const drwnFactor &psiB) |
| returns the set of separator variables between factors psiA and psiB | |
Protected Types | |
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typedef drwnTriplet< int, int, drwnClique > | _drwnFactorEdge |
Protected Member Functions | |
| void | computeSeparatorSets () |
| computes the sep-sets for each edge in _edges | |
Protected Attributes | |
| drwnVarUniversePtr | _pUniverse |
| all variables in the universe | |
| vector< drwnTableFactor * > | _factors |
| list of factors in the model | |
| vector< _drwnFactorEdge > | _edges |
| list of edges and sep-sets | |
Container and utility functions for factor graphs.
1.8.6